Hotels in Nagasaki Prefecture

Search and compare Nagasaki Prefecture hotels from hundreds of travel sites on HotelsCombined and save.

...and more

Learn why travellers love HotelsCombined

Compare hotel ratings collected from thousands of user reviews.

One search gives you accurate pricing on affordable hotels.

Customie your results by hotel chain, amenities, price and more.

Search for hotels as many times as you want – for free.

Refine Your Search

Star ratings
Guest Ratings
Amenities
Freebies
See all filters

Popular hotels in Nagasaki Prefecture

Discover well-known properties in Nagasaki Prefecture that are favoured by visitors more than others. There are 936 hotels in Nagasaki Prefecture and price data was last updated on 2 November 2025. The average price for a hotel in Nagasaki Prefecture is S$ 159/night.
Enter your travel dates to find the best prices.
Filter by star ratings
All filters
1-1Onoue, Nagasaki, Japan
Hotel with a 24-hour front desk, steps from Amu Plaza Nagasaki Dry cleaning, laundry facilities, and a 24-hour front desk are available at this hotel. WiFi in public areas is free. Other amenities include a vending machine. JR KYUSHU HOTEL Nagasaki offers 144 accommodations with slippers and hair dryers. Flat-screen televisions come with digital channels. Bathrooms include shower/tub combinations with deep soaking bathtubs, bidets, toilets with an electronic bidet, and complimentary toiletries. Guests can surf the web using the complimentary wireless Internet access. Business-friendly amenities include desks and desk chairs. Housekeeping is provided daily.
Free Wi-Fi
Spa
8.5
Excellent
3138 reviews
Location
5.2 km from city centre
S$ 68
6 Huis Ten Bosch, Sasebo, Japan
Refresh your body in our Grand Bath and wash away weariness of the journey. At the Western and Japanese restaurants a special dinner for our 15th anniversary available. We also offer an accommodation plan for groups of 4 to 6 persons in which we ensure rooms next to each other or in front of the other. 3 minutes walk to the entrance of Huis Ten Bosch!
Free Wi-Fi
8.5
Excellent
2610 reviews
Location
13.9 km from city centre
S$ 121
Huis Ten Bosch-Cho 7-7, Sasebo, Japan
Hotel with a restaurant, a quick walk to Huis Ten Bosch This smoke-free hotel features a restaurant, a bar/lounge, and a coffee shop/cafe. WiFi in public areas is free. Additionally, dry cleaning, laundry facilities, and a 24-hour front desk are onsite. Hotel Amsterdam Huis Ten Bosch offers 202 air-conditioned accommodations with safes and coffee/tea makers. LCD televisions come with digital channels. Bathrooms include separate bathtubs and showers with deep soaking bathtubs, slippers, bidets, and complimentary toiletries. This Sasebo hotel provides complimentary wireless Internet access. Business-friendly amenities include desks and desk chairs. Housekeeping is provided daily. The recreational activities listed below are available either on site or nearby; fees may apply.
Free Wi-Fi
Parking
8.6
Excellent
420 reviews
Location
14.4 km from city centre
S$ 194
Akebono-Machi 40-23, Nagasaki, Japan
The hotel is located on the hillside of Mount Inasa,surrounded by greenery,looking peaceful and quiet.During the day,the streets with their many undulating slopes catch the eye,in,contrast and complement to tha mysterious night view.We urge you to enjoy to your heart's content the romance of beautifully illuminated Nagasaki.
Free Wi-Fi
8.3
Excellent
797 reviews
Location
4.1 km from city centre
S$ 107
Miura-Cho 1-4, Sasebo, Japan
Hotel with free breakfast, steps from Miuracho Catholic Church Self parking, laundry facilities, and a 24-hour front desk are available at this hotel. Free buffet breakfast and free WiFi in public areas are also provided. Other amenities include a vending machine. Weekly housekeeping is available. Toyoko Inn Sasebo Ekimae offers 272 air-conditioned accommodations with slippers and hair dryers. Flat-screen televisions are featured in guestrooms. Bathrooms include shower/tub combinations with deep soaking bathtubs, bidets, and complimentary toiletries. This Sasebo hotel provides complimentary wireless Internet access. Business-friendly amenities include desks and phones. Housekeeping is provided weekly.
Free Wi-Fi
8.1
Excellent
328 reviews
Location
3.8 km from city centre
S$ 73
3-2 Kamikyo-machi, Sasebo, Japan
Offering simply furnished, air-conditioned rooms with a wood desk and private bathroom, Central Hotel is 800 metres from JR Sasebo Train Station. The hotel has a Japanese/Western restaurant. All rooms at Central Hotel Sasebo are equipped with a fridge and a TV. A bath, amenities and a hairdryer are included in the en suite bathroom. Naka-Sasebo Train Station is 250 metres away. Huis Ten Bosch Theme Park is 15 km from the hotel, and Mount Eboshi is 8 km away. A small library is available, and the hotel features a coin-operated laundry facility. Guests may use the shared microwave to heat food. The 24-hour front desk offers luggage storage services. Restaurant serves a breakfast buffet, while Japanese and Western dishes are available for lunch and dinner.
Free Wi-Fi
7.8
Good
546 reviews
Location
3.1 km from city centre
S$ 68
12-7 Shiomi-cho, Sasebo, Japan
Hotel in Sasebo with 2 restaurants and a 24-hour front desk This hotel features 2 restaurants, self parking, and a microwave in a common area. WiFi in public areas is free. Additionally, dry cleaning, laundry facilities, and a 24-hour front desk are onsite. Housekeeping is available once per stay. Sasebo Washington Hotel offers 190 air-conditioned accommodations with bathrobes and slippers. Beds feature down comforters. Flat-screen televisions are featured in guestrooms. Bathrooms include shower/tub combinations with deep soaking bathtubs, bidets, complimentary toiletries, and hair dryers. Business-friendly amenities include desks and phones. Housekeeping is provided once per stay.
Free Wi-Fi
7.7
Good
1504 reviews
Location
4.0 km from city centre
S$ 70
8-17 Shirahae-cho, Sasebo, Japan
Superbly convenient location! Just a minute's walk from the first floor of the hotel is the terminal from which buses leave for Fukuoka, Fukuoka Airport, Nagasaki, and Nagasaki Airport! Plus only a minute's walk from JR Sasebo Station! The perfect hub for exploring Huis Ten Bosch, Saikai Pearl Sea Resort, and Hirado!
Free Wi-Fi
Airport shuttle
7.7
Good
2242 reviews
Location
3.9 km from city centre
S$ 61
771-1 Imayashiki, Izuhara-Machi, Tsushima, Japan
Hotel with free breakfast, a quick walk to Tsushima City Office Along with self parking, this smoke-free hotel has a microwave in a common area and a business center. Free buffet breakfast and free WiFi in public areas are also provided. Additionally, dry cleaning, laundry facilities, and a 24-hour front desk are onsite. Weekly housekeeping is available. Toyoko Inn Tsushima Izuhara offers 245 accommodations with slippers and hair dryers. Flat-screen televisions come with pay movies. Bathrooms include shower/tub combinations, bidets, and complimentary toiletries. This Tsushima hotel provides complimentary wired and wireless Internet access. Business-friendly amenities include desks and phones. Housekeeping is offered weekly and irons/ironing boards can be requested. Housekeeping is provided on a limited basis.
Free Wi-Fi
8.4
Excellent
794 reviews
Location
0.3 km from city centre
S$ 79
Huis Ten Bosch-Cho 6-5, Sasebo, Japan
Hotel with a restaurant, near Huis Ten Bosch Along with a restaurant, this smoke-free hotel has laundry facilities and a 24-hour front desk. WiFi in public areas is free. Other amenities include a vending machine. Housekeeping is available on request. Hotel Rotterdam Huis Ten Bosch offers 200 air-conditioned accommodations with safes and complimentary bottled water. This Sasebo hotel provides complimentary wireless Internet access. Bathrooms include shower/tub combinations with deep soaking bathtubs, slippers, bidets, and hair dryers. Business-friendly amenities include desks and desk chairs, as well as phones; local, long-distance, and international calls are all complimentary (restrictions may apply). Housekeeping is provided on request. The recreational activities listed below are available either on site or nearby; fees may apply.
Free Wi-Fi
Air conditioning
8.4
Excellent
11 reviews
Location
13.7 km from city centre
S$ 101

Travel insights for hotels in Nagasaki Prefecture

Use these up-to-date, data-driven insights about booking a hotel in Nagasaki Prefecture including ideal times to book, pricing trends, and more.

What is the cheapest month to book a hotel in Nagasaki Prefecture?

The cheapest month to book a hotel in Nagasaki Prefecture is September (S$ 92). Conversely, the most expensive month to stay in Nagasaki Prefecture is November (S$ 315).

What is the cheapest day to stay in a hotel in Nagasaki Prefecture?

The cheapest day to stay in Nagasaki Prefecture is Wednesday (S$ 31). On the other hand, travelers can expect to pay the most on Friday, when the average nightly price is S$ 199.

How much is a hotel in Nagasaki Prefecture tonight?

Users have found prices for hotels in Nagasaki Prefecture tonight starting as low as S$ 29, rising to an average cost of S$ 250, based on searches in the last 72 hours. Prices start from S$ 60 for a 4-star hotel in Nagasaki Prefecture for tonight.

How much is a Nagasaki Prefecture hotel room this weekend?

In the past 72 hours, we’ve seen prices for hotels in Nagasaki Prefecture this weekend for as little as S$ 61/night. If you’re specifically looking for a 3-star hotel this weekend, our users have found prices as low as S$ 61/night. For a 4-star hotel in Nagasaki Prefecture, the cheapest rate recently found was S$ 114/night for this weekend.

How far ahead should you book a hotel in Nagasaki Prefecture?

Save money by booking a hotel at least 3 days before your trip to Nagasaki Prefecture. The lowest price found when booking 3 days ahead was S$ 86 per night.

Top-rated Nagasaki Prefecture hotels

Browse through properties in Nagasaki Prefecture that have received the highest ratings from guests. There are currently 936 properties in Nagasaki Prefecture and data was last updated on 2 November 2025.
Some of the best Nagasaki Prefecture hotel options as decided by our users. Skim through hotel descriptions and user reviews to find the right one for you.
567-1 Naganogo, Hasami, Japan
3.6 km from city centre
Free Wi-Fi
Parking
S$ 69
Avg. per night
Dozamachi 3-12, Nagasaki, Japan
6.2 km from city centre
Free Wi-Fi
S$ 70
Avg. per night
2520 Okubo-Cho, Hirado, Japan
0.6 km from city centre
Free Wi-Fi
Parking
S$ 100
Avg. per night
320 Obamacho Unzen, Unzen, Japan
12.7 km from city centre
Free Wi-Fi
Parking
S$ 362
Avg. per night
960, Aza Daranoki, Hitakatsu, Tsushima, Japan
52.5 km from city centre
Free Wi-Fi
Parking
S$ 77
Avg. per night
2-1 Daikoku-Machi, Nagasaki, Japan
5.2 km from city centre
Free Wi-Fi
S$ 65
Avg. per night
7-24 Douza-Machi, Nagasaki, Japan
6.3 km from city centre
Free Wi-Fi
Spa
S$ 86
Avg. per night
Yon-Jyuroku, Nagasaki, Japan
3.6 km from city centre
Free Wi-Fi
S$ 60
Avg. per night
4-1 Miura-Cho, Sasebo, Japan
3.7 km from city centre
Free Wi-Fi
S$ 62
Avg. per night
Imagawamachi 930, Shimabara, Japan
0.5 km from city centre
Free Wi-Fi
Air conditioning
S$ 74
Avg. per night
5-24 Minato-machi, Sasebo, Japan
2.6 km from city centre
Free Wi-Fi
S$ 73
Avg. per night
760-1 Gonoura-Cho Honmurafure, Iki, Japan
0.5 km from city centre
Free Wi-Fi
Parking
Airport shuttle
S$ 151
Avg. per night

Cheapest hotels in Nagasaki Prefecture, Japan

Discover affordable stays in Nagasaki Prefecture that provide a quality experience without breaking the bank. Hotels in Nagasaki Prefecture can be found for as low as S$ 31 per night. There is currently one property in Nagasaki Prefecture that can be booked for this price. Tsudoi Guest House is one of the hotels that can be booked for the lowest price in Nagasaki Prefecture. Price data was last updated on 2 November 2025
These are the lowest prices we've found on hotels in Nagasaki Prefecture at the moment. If you have the flexibility, change the dates selected to compare prices.
323-2-2 Obama-Cho, Unzen, Japan
12.4 km from city centre
Free Wi-Fi
Air conditioning
S$ 31
Avg. per night
2190-11 Motegi-Machi, Nagasaki, Japan
12.1 km from city centre
Free Wi-Fi
Parking
S$ 47
Avg. per night
3F, 6-1 Motofuna-Machi, Nagasaki, Japan
5.6 km from city centre
Free Wi-Fi
S$ 49
Avg. per night
7-16, Dozamachi, Nagasaki, Japan
6.4 km from city centre
Free Wi-Fi
S$ 49
Avg. per night
Matsuzatomachi 1538-1, Isahaya, Japan
8.0 km from city centre
Free Wi-Fi
Parking
S$ 51
Avg. per night
8-8 Tokiwacho, Sasebo, Japan
2.6 km from city centre
Free Wi-Fi
S$ 55
Avg. per night
4-10 Chikugomachi, Nagasaki, Japan
5.5 km from city centre
S$ 55
Avg. per night
6-38 Motoshikkuimachi, Nagasaki, Japan
6.6 km from city centre
Spa
S$ 55
Avg. per night
1-20 Edo-Machi, Nagasaki, Japan
5.8 km from city centre
Free Wi-Fi
S$ 57
Avg. per night
7-3 Daikokumachi, Nagasaki, Nagasaki, Japan
5.3 km from city centre
Free Wi-Fi
S$ 57
Avg. per night
2375 Ashibecho Hakozakinakayamafure, Iki, Japan
8.0 km from city centre
Free Wi-Fi
Parking
S$ 57
Avg. per night
9-2 Daikoku-Cho, Nagasaki, Japan
5.4 km from city centre
Free Wi-Fi
S$ 59
Avg. per night
4-28 Chikugomachi, Nagasaki, Japan
5.5 km from city centre
Free Wi-Fi
S$ 59
Avg. per night
1-22 Oura-machi, Nagasaki, Japan
6.4 km from city centre
Free Wi-Fi
S$ 59
Avg. per night
35-5 Goto-Cho, Nagasaki, Japan
5.7 km from city centre
Free Wi-Fi
S$ 60
Avg. per night
1-15 Motoshima-Cho, Sasebo, Japan
3.0 km from city centre
S$ 60
Avg. per night

Hotel prices in Nagasaki Prefecture

Get a sense of the average price and most popular properties to stay in Nagasaki Prefecture to help you budget for your trip accordingly. Hotels that are booked the most in each class receive the “Most popular” badge. Hotels with the “Best value” badge are the most popular hotels in Nagasaki Prefecture at attractive prices. Price data was last updated on 2 November 2025.
Prices on hotels (average nightly rate) for the dates selected, broken down by hotel class. You'll also find the most popular and best value properties within each hotel class.
4 stars +
2 stars and under
3F, 6-1 Motofuna-Machi, Nagasaki, Japan
S$ 49
7-16, Dozamachi, Nagasaki, Japan
S$ 49
960, Aza Daranoki, Hitakatsu, Tsushima, Japan
S$ 77
2190-11 Motegi-Machi, Nagasaki, Japan
S$ 47

Other accommodations in Nagasaki Prefecture

Find the perfect hostel, theme hotel, or holiday rental for your stay in Nagasaki Prefecture.
3F, 6-1 Motofuna-Machi, Nagasaki, Japan
5.6 km from city centre
Free Wi-Fi
S$ 49
Avg. per night
11-2 Mezame-Machi, Nagasaki, Japan
4.0 km from city centre
Free Wi-Fi
Air conditioning
S$ 79
Avg. per night
7-16, Dozamachi, Nagasaki, Japan
6.4 km from city centre
Free Wi-Fi
S$ 49
Avg. per night

Where to stay in Nagasaki Prefecture

Explore different neighbourhoods and areas within Nagasaki Prefecture to find the perfect location for your stay. Map data was last updated on 2 November 2025.
Use the map to find hotels in Nagasaki Prefecture that are close to the points of interest you'll be frequenting. As an added benefit, users can click a hotel they're interesting in to find helpful information and deals for that hotel.

Facts about staying in Nagasaki Prefecture

Find useful tips and insights about staying in Nagasaki Prefecture to help you make the most of your experience. FAQs were last updated on 2 November 2025.
  • Where is the best place to stay in Nagasaki Prefecture?

    You can find several places worth visiting in Nagasaki Prefecture. Nagasaki, Sasebo, and Unzen are some of the most popular amongst our users.

  • What are the best hotels in Nagasaki Prefecture?

    Nagasaki Marriott Hotel (9.4/10 from 201 reviews), Fav Lux Nagasaki (8.8/10 from 241 reviews), and Hostel Casa Noda (8.3/10 from 1,283 reviews) are all highly rated places to stay in Nagasaki Prefecture.

  • What is a good hotel near Huis Ten Bosch?

    Hotel Nikko Huis Ten Bosch is a hotel near Huis Ten Bosch that is popular with HotelsCombined users, scoring 8.5 across 2,610 reviews.

  • What is a good hotel in Nagasaki Prefecture near Nagasaki Railway Station?

    For a good hotel near to Nagasaki Railway Station, consider Hotel Forza Nagasaki - it is rated 8.6/10 from 4,139 HotelsCombined reviews.

  • Is there a good hotel near Urakami Station?

    If you’re looking for good hotels near Urakami Station, consider Jr Kyushu Hotel Nagasaki (rated 8.5 over 3,138 reviews).

  • What is the cheapest city to visit in Nagasaki Prefecture?

    The cheapest city in Nagasaki Prefecture to stay in is Nagasaki with average nightly rates of S$ 158. The second most affordable city in Nagasaki Prefecture is Unzen at around S$ 138 per night.

  • What is the most popular city in Nagasaki Prefecture to stay in?

    The majority of our users looked for stays in Nagasaki, which makes it the most popular city to stay in Nagasaki Prefecture. Sasebo and Unzen in Nagasaki Prefecture are also popular among our users if you’re looking for more recommendations.

  • What is the cheapest city to visit in Nagasaki Prefecture?

    In Nagasaki Prefecture, the most sought-after hotel chains are Nikko Hotels Intl, Okura Hotels & Resorts, and Washington Hotel Chain, making them the top three choices based on our data.

  • What are the most popular landmarks to visit in Nagasaki Prefecture?

    The most popular landmarks in Nagasaki Prefecture are Huis Ten Bosch (in Sasebo), Nagasaki Railway Station (in Nagasaki), and Urakami Station (in Nagasaki) according to our user data. If you plan to visit any of these, we recommend finding a hotel nearby to cut down on travel time.

See more FAQs

Find better results for your stay in Nagasaki Prefecture

Search cheap hotels with HotelsCombined. Use the hotel finder to search for the cheapest hotel deal for all major destinations around the world. HotelsCombined searches hundreds of hotel booking sites to help you find hotels and book hotels that suit you best. Since HotelsCombined searches many hotel sites at once, you can find discount hotels quickly. Discover hotel discounts now and make your hotel reservation today.